DNA Binding Site
| Accessions: | CCTTATCA (UniPROBE 20160601), MA0482.3.11 (JASPAR 2024), MA0482.3.16 (JASPAR 2024), MA0482.3.18 (JASPAR 2024), MA0482.3.2 (JASPAR 2024), MA1701.2.19 (JASPAR 2024), MA1970.2.13 (JASPAR 2024), MA1970.2.14 (JASPAR 2024), MA1970.2.17 (JASPAR 2024), MA2165.1.1 (JASPAR 2024) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae, Homo sapiens, Caenorhabditis elegans |
| Libraries: | UniPROBE 20160601 1, JASPAR 2024 2 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | CCTTATCA |
| Type: | Heterodimer |
| Binding TFs: | UP00347A (GATA zinc finger) UP00080A (GATA zinc finger) UP00100A (GATA zinc finger) UP00287A (GATA zinc finger) UP00318A (GATA zinc finger) P43694 (GATA zinc finger, GATA-type transcription activator, N-terminal ) Q10655 (GATA zinc finger) Q9UHF7 (GATA zinc finger) P28515 P43694 Q10655 Q9UHF7 |
| Binding Motifs: | UP00080A_1 wwwrcTGATAAGrrgat UP00100A_1 wawmkwGATAAGarttr UP00287A_1 yyatytyCTTATCgsrddhh UP00318A_1 rkwwhGsCcTTATCarsmmwa UP00347A_1 twvmrrCYGATAAGrrwkwh UP00080A_2 rmcmrAGATATCwgybk UP00100A_2 gsgrCGATATCGsmgyd MA0482.3 cCTTATCT MA1701.2 tCTTATCA MA1970.2 TCTTATCT MA2165.1 TCTTATCT |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] Yamagata T, Nishida J, Sakai R, Tanaka T, Honda H, Hirano N, Mano H, Yazaki Y, Hirai H. Of the GATA-binding proteins, only GATA-4 selectively regulates the human interleukin-5 gene promoter in interleukin-5-producing cells which express multiple GATA-binding proteins. Molecular and cellular biology 15:3830-9 (1995). [Pubmed] Hawkins MG, McGhee JD. elt-2, a second GATA factor from the nematode Caenorhabditis elegans. J Biol Chem 270:14666-71 (1995). [Pubmed] Serandour AA, Mohammed H, Miremadi A, Mulder KW, Carroll JS. TRPS1 regulates oestrogen receptor binding and histone acetylation at enhancers. Oncogene 37:5281-5291 (2018). [Pubmed] Shim YH. elt-1, a gene encoding a Caenorhabditis elegans GATA transcription factor, is highly expressed in the germ lines with msp genes as the potential targets. Mol Cells 9:535-41 (1999). [Pubmed] |
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