DNA Binding Site
| Accessions: | CCACGTGG (UniPROBE 20160601), MA0104.5.1 (JASPAR 2024), MA0104.5.19 (JASPAR 2024), MA0104.5.2 (JASPAR 2024), MA0104.5.20 (JASPAR 2024), MA0104.5.5 (JASPAR 2024), MA0104.5.6 (JASPAR 2024), MA0147.4.10 (JASPAR 2024), MA0147.4.17 (JASPAR 2024), MA0147.4.18 (JASPAR 2024), MA0147.4.9 (JASPAR 2024) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae, Caenorhabditis elegans, Homo sapiens |
| Libraries: | UniPROBE 20160601 1, JASPAR 2024 2 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | CCACGTGG |
| Type: | Heterodimer |
| Binding TFs: | P01106 (Helix-loop-helix DNA-binding domain, Myc amino-terminal region, Myc leucine zipper domain) P04198 (Helix-loop-helix DNA-binding domain, Myc amino-terminal region) UP00309A (Helix-loop-helix DNA-binding domain) UP00332A (Helix-loop-helix DNA-binding domain) UP00367A (Helix-loop-helix DNA-binding domain) UP00373A (Helix-loop-helix DNA-binding domain) UP00382A (Helix-loop-helix DNA-binding domain) UP00383A (Helix-loop-helix DNA-binding domain) UP00457A (Basic region leucine zipper) UP00060A (Helix-loop-helix DNA-binding domain) P01106 P04198 |
| Binding Motifs: | UP00060A_1 kgmsCACGTGgkcrkk UP00309A_1 kaycwgkCACGTGactbvymg UP00332A_1 gwcymasCACGTGsycskhw UP00367A_1 yrdamCACGTGktymr UP00373A_1 awwAarAAACAwws UP00382A_1 Awkwwtwaaaawwa UP00383A_1 wmawgGCACGTGycwwa UP00060A_2 ktGyCAyGcGaCdk UP00373A_2 / UP00382A_2 twdasCACGTGskawb UP00457A_1 srkggGgACACGTGTymasawc MA0104.5 CCACGTGG MA0147.4 CCACGTGc |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] Chen X, Xu H, Yuan P, Fang F, Huss M, Vega V.B, Wong E, Orlov Y.L, Zhang W, Jiang J, Loh Y.H, Yeo H.C, Yeo Z.X, Narang V, Govindarajan K.R, Leong B, Shahab A, Ruan Y, Bourque G, Sung W.K, Clarke N.D, Wei C.L, Ng H.H. Integration of external signaling pathways with the core transcriptional network in embryonic stem cells. Cell 133:1106-17 (2008). [Pubmed] |
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