DNA Binding Site
| Accessions: | CATAAAAA (UniPROBE 20160601) |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | CATAAAAA |
| Type: | Heterodimer |
| Binding TFs: | UP00117A (Homeobox domain) UP00121A (Homeobox domain) UP00140A (Homeobox domain) UP00207A (Homeobox domain) UP00246A (Homeobox domain) |
| Binding Motifs: | UP00117A_1 / UP00140A_2 ywarGTCGTAAAawyht UP00121A_1 / UP00140A_1 mrkgyAATAAAAtwwww UP00140A_5 wraryTAATTArytgkw UP00140A_3 ywavGTCGTAAAatywt UP00140A_4 mwwyyAATAAAAhymh UP00207A_1 rrrgymATWAAAwycr UP00246A_1 waarGTCRTAAAayrk |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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