DNA Binding Site
| Accessions: | CCCACCCC (UniPROBE 20160601) |
| Organisms: | Mus musculus, Plasmodium falciparum, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | CCCACCCC |
| Type: | Heterodimer |
| Binding TFs: | UP00043A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) UP00433A (AP2 domain) UP00443B (AP2 domain) UP00587C (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00599A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00599C (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00600A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00600B (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00629B (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) |
| Binding Motifs: | UP00043A_1 wcTTTCkAGGAAttys UP00043A_2 hbscCCgCCCCwhmwm UP00433A_1 yygtrwyAGCTAGCTvrckmtg UP00443B_1 mytytyayrTmTTGCCwhcmbmm UP00587C_1 skrgcwrGGGGGGGsrGdyarkk UP00599A_1 wsdymysCCCCrCCCmsyygrm UP00599A_2 wwtwwrrCCCCGCCCywymmsy UP00599C_2 wwhywmcCCGCCCmmCcrbksws UP00600A_1 ythdwmmmCGCCCCCybskyam UP00600B_1 yywdacmmCGCCCCCybskbrm UP00629B_1 dttdryggGGtGgGwawakamck |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.