DNA Binding Site
| Accessions: | AAGTACTC (UniPROBE 20160601) |
| Organisms: | Mus musculus, Caenorhabditis elegans |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | AAGTACTC |
| Type: | Heterodimer |
| Binding TFs: | UP00107A (Homeobox domain) UP00119A (Homeobox domain) UP00165A (Homeobox domain) UP00231A (Homeobox domain) UP00396A (Homeobox domain) |
| Binding Motifs: | UP00107A_1 waarCCACTTrAmwty UP00119A_1 wttwrAGTACTyrAaty UP00165A_1 yaAgCCACTTgAmhtt UP00231A_1 hwarCCACTTGArawtw UP00396A_1 / UP00396A_2 tsdywrrCCACTTsAmawtwmk |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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