DNA Binding Site

Accessions: 3d6y_B (3D-footprint 20231221), 3d6z_B (3D-footprint 20231221)
Organisms: Bacillus subtilis, strain 168
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 24
Sequence: TGACCCTCCCCTTAGGGGAGGGTC
Binding TFs: 3d6y_A / 3d6z_A (MerR family regulatory protein, GyrI-like small molecule binding domain, MerR HTH family regulatory protein)
Binding Motifs: 3d6y_A CCCT
3d6z_A CCCT
Publications: Newberry K.J, Huffman J.L, Miller M.C, Vazquez-Laslop N, Neyfakh A.A, Brennan R.G. Structures of BmrR-drug complexes reveal a rigid multidrug binding pocket and transcription activation through tyrosine expulsion. The Journal of biological chemistry 283:26795-804 (2008). [Pubmed]

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