DNA Binding Site

Accessions: 1gcc_C (3D-footprint 20231221), 5wx9_C (3D-footprint 20231221)
Organisms: Arabidopsis thaliana
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 11
Sequence: GCTGGCGGCTA
Type: Heterodimer
Binding TFs: 1gcc_A (AP2 domain)
5wx9_A (AP2 domain)
Binding Motifs: 1gcc_A TGGCGGCTA
5wx9_A CTGGcGGCTa
Publications: Allen M.D, Yamasaki K, Ohme-Takagi M, Tateno M, Suzuki M. A novel mode of DNA recognition by a beta-sheet revealed by the solution structure of the GCC-box binding domain in complex with DNA. The EMBO journal 17:5484-96 (1998). [Pubmed]

Chen CY, Lin PH, Chen KH, Cheng YS. Structural insights into Arabidopsis ethylene response factor 96 with an extended N-terminal binding to GCC box. Plant Mol Biol : (2020). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.