DNA Binding Site

Accessions: ACAGGCGC (UniPROBE 20160601)
Organisms: Mus musculus, Caenorhabditis elegans
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: ACAGGCGC
Type: Heterodimer
Binding TFs: UP00036A (Helix-loop-helix DNA-binding domain, Myogenic Basic domain)
UP00548A (Helix-loop-helix DNA-binding domain)
Binding Motifs: UP00036A_1 rrrgrACAGbTGtyyg
UP00036A_2 vsmrmCAgmCgcrcc
UP00548A_1 sGgamrGrCACGTGtCsyhCysy
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

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