DNA Binding Site
| Accessions: | ATTTTATG (UniPROBE 20160601) |
| Organisms: | Mus musculus, Drosophila melanogaster |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | ATTTTATG |
| Type: | Heterodimer |
| Binding TFs: | UP00235A (Homeobox domain, Protein of unknown function (DUF3528)) UP00207A (Homeobox domain) UP00217A (Homeobox domain) UP00245A (Homeobox domain) UP00264A (Homeobox domain) UP00503A (Homeobox domain) |
| Binding Motifs: | UP00264A_3 wwwbCTCGTAAAawtt UP00207A_1 rrrgymATWAAAwycr UP00217A_1 / UP00264A_1 dmgGyMATWAAAtkmw UP00235A_1 yaarGTCGTAAAayrk UP00245A_1 twarGTCRTAAAaysk UP00264A_2 waarGTCRTAAAayrk UP00264A_4 ctrarcTAATTAmyky UP00503A_1 ggrarrgGymATWAAattyhba |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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