DNA Binding Site

Accessions: 3ket_C (3D-footprint 20231221), MA0102.5.13 (JASPAR 2024)
Organisms: strain NEM316, Streptococcus agalactiae serotype III, Homo sapiens
Libraries: 3D-footprint 20231221 1, JASPAR 2024 2
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 10
Sequence: ATTTCACAAT
Type: Heterodimer
Binding TFs: P49715 (bZIP transcription factor, Basic region leucine zipper)
3ket_A (CoA binding domain, Putative DNA-binding protein N-terminus)
P49715
Binding Motifs: 3ket_A tTTCACAA
MA0102.5 ATTGCACAAt
Publications: Osada S, Yamamoto H, Nishihara T, Imagawa M. DNA binding specificity of the CCAAT/enhancer-binding protein transcription factor family. J Biol Chem 271:3891-6 (1996). [Pubmed]

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