DNA Binding Site

Accessions: 1d3u_C (3D-footprint 20231221)
Organisms: Pyrococcus woesei
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 23
Sequence: AGAGTAAAGTTTAAATACTTATA
Binding TFs: 1d3u_A (Transcription factor TFIID (or TATA-binding protein, TBP))
Binding Motifs: 1d3u_A TTTAAATA
1d3u_AB TATTTAAAnnTTACT
Publications: Littlefield O, Korkhin Y, Sigler P.B. The structural basis for the oriented assembly of a TBP/TFB/promoter complex. Proceedings of the National Academy of Sciences of the United States of America 96:13668-73 (1999). [Pubmed]

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