DNA Binding Site

Accessions: MA0964.3.1 (JASPAR 2024), MA0964.3.16 (JASPAR 2024), MA0964.3.4 (JASPAR 2024), MA2175.1.5 (JASPAR 2024), MA2176.1.16 (JASPAR 2024), MA2301.1.12 (JASPAR 2024), MA2304.1.11 (JASPAR 2024), MA2304.1.16 (JASPAR 2024), MA2304.1.2 (JASPAR 2024), MA2304.1.7 (JASPAR 2024)
Organisms: Arabidopsis thaliana, Caenorhabditis elegans, Drosophila melanogaster
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 8
Sequence: TCACGTGC
Type: Heterodimer
Binding TFs: Q18711 (Helix-loop-helix DNA-binding domain)
Q9LEZ3 (Helix-loop-helix DNA-binding domain)
G5EEH5
O61735
Q18711
Q9LEZ3
Q9VGZ5
Binding Motifs: MA0964.3 TCACGTGA
MA2175.1 cCACGTGg
MA2176.1 cCACGTGg
MA2301.1 tCACGTGa
MA2304.1 gCACGTGc
Publications: Yin Y, Vafeados D, Tao Y, Yoshida S, Asami T, Chory J. A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis. Cell 120:249-59 (2005). [Pubmed]

Yuan J, Tirabassi RS, Bush AB, Cole MD. The C. elegans MDL-1 and MXL-1 proteins can functionally substitute for vertebrate MAD and MAX 17:1109-18 (Oncogene.). [Pubmed]

Grove C.A, De Masi F, Barrasa M.I, Newburger D.E, Alkema M.J, Bulyk M.L, Walhout A.J. A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors. Cell 138:314-27 (2009). [Pubmed]

Zhu LJ, Christensen RG, Kazemian M, Hull CJ, Enuameh MS, Basciotta MD, Brasefield JA, Zhu C, Asriyan Y, Lapointe DS, Sinha S, Wolfe SA, Brodsky MH. FlyFactorSurvey: a database of Drosophila transcription factor binding specificities determined using the bacterial one-hybrid system. Nucleic Acids Res : (2011). [Pubmed]

Nitta KR, Jolma A, Yin Y, Morgunova E, Kivioja T, Akhtar J, Hens K, Toivonen J, Deplancke B, Furlong EE, Taipale J. Conservation of transcription factor binding specificities across 600 million years of bilateria evolution. Elife : (2015). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.