DNA Binding Site
| Accessions: | CACGTGCA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae, Caenorhabditis elegans |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | CACGTGCA |
| Type: | Heterodimer |
| Binding TFs: | UP00309A / UP00397A (Helix-loop-helix DNA-binding domain) UP00332A (Helix-loop-helix DNA-binding domain) UP00365A (Helix-loop-helix DNA-binding domain) UP00367A (Helix-loop-helix DNA-binding domain) UP00370A (Helix-loop-helix DNA-binding domain) UP00373A (Helix-loop-helix DNA-binding domain) UP00379A (Helix-loop-helix DNA-binding domain) UP00382A (Helix-loop-helix DNA-binding domain) UP00383A (Helix-loop-helix DNA-binding domain) UP00050A (Helix-loop-helix DNA-binding domain) UP00548B (Helix-loop-helix DNA-binding domain) |
| Binding Motifs: | UP00050A_1 rrawkrgTCACGTGAsymrywy UP00309A_1 kaycwgkCACGTGactbvymg UP00332A_1 gwcymasCACGTGsycskhw UP00365A_1 wswaTCACGTGAywawy UP00367A_1 yrdamCACGTGktymr UP00370A_1 tawgrCACGTGTchwaw UP00373A_1 awwAarAAACAwws UP00379A_1 ybtrvarwaaarwg UP00382A_1 Awkwwtwaaaawwa UP00383A_1 wmawgGCACGTGycwwa UP00397A_1 wswaywsrTCACGTGmtcdgmy UP00050A_2 ygysryTmCACGTGGArrsmrgt UP00373A_2 / UP00382A_2 twdasCACGTGskawb UP00548B_1 sGgamrGrCACGTGtCsyhCysy |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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