DNA Binding Site

Accessions: 5krb_E (3D-footprint 20231221)
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 16
Sequence: TCTAGCCTTGACCTCT
Binding TFs: 5krb_G (Zinc finger, C4 type (two domains))
Binding Motifs: 5krb_BG GGTCAaGGnCA
5krb_G TcnaGGnCA
Publications: Weikum ER, Tuntland ML, Murphy MN, Ortlund EA. A Structural Investigation into Oct4 Regulation by Orphan Nuclear Receptors, Germ Cell Nuclear Factor (GCNF), and Liver Receptor Homolog-1 (LRH-1). J Mol Biol : (2016). [Pubmed]

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