DNA Binding Site
| Accessions: | GCCCACCC (UniPROBE 20160601) |
| Organisms: | Mus musculus, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | GCCCACCC |
| Type: | Heterodimer |
| Binding TFs: | UP00043A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) UP00538A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00539A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00540A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00587C (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00599C (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00614E (Homeobox domain) UP00629B (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) |
| Binding Motifs: | UP00043A_1 wcTTTCkAGGAAttys UP00043A_2 hbscCCgCCCCwhmwm UP00538A_1 / UP00538A_2 kkgasrGGACCACCCrGrtmGm UP00538A_3 rhkvchwrCCmCCCACrctgtkk UP00538A_4 / UP00538A_5 hmsrgyrGACCACCCaGsdgGw UP00538A_6 swtmrbyaCCrCCCACattmttr UP00539A_1 / UP00539A_2 kyrshvrGACCACCCakrdygy UP00539A_3 rytmyyagCCyCCCACgtyrksk UP00539A_4 / UP00539A_5 ktmsdwrGACCACCCAgrwdgb UP00539A_6 wrykascgkGGGTGGCrrssray UP00540A_1 / UP00540A_2 sykksvrGACCACCCAcrwysmt UP00540A_3 kmTTvvCryGGwGGTCywrmyt UP00540A_4 / UP00540A_5 hasrgkgGACCACCCrgvdrgw UP00540A_6 rytcmhygCCaCmCacgckhgy UP00587C_1 skrgcwrGGGGGGGsrGdyarkk UP00599C_2 wwhywmcCCGCCCmmCcrbksws UP00614E_1 wbmrwkgvtrATyakcmwwwwmw UP00629B_1 dttdryggGGtGgGwawakamck |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.