DNA Binding Site

Accessions: 6pw2_G (3D-footprint 20231221)
Organisms: Epstein-Barr virus (strain B95-8) (HHV-4), Human herpesvirus 4
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 45
Sequence: ATCGATAGCATATGCTTCCCGTTGGGTAACATATGCTATTGAATT
Binding TFs: 6pw2_L (Epstein Barr virus nuclear antigen-1, DNA-binding domain)
Binding Motifs: 6pw2_IJKL AATAGCATnTnTTACCCnnnGGGAAGCnnnnGnTAT
Publications: Malecka KA, Dheekollu J, Deakyne JS, Wiedmer A, Ramirez UD, Lieberman PM, Messick TE. Structural Basis for Cooperative Binding of EBNA1 to the Epstein-Barr Virus Dyad Symmetry Minimal Origin of Replication. J Virol : (2019). [Pubmed]

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