DNA Binding Site

						

			
Accessions: CACGTGGA (UniPROBE 20160601)

			
Organisms: Mus musculus, Saccharomyces cerevisiae, Caenorhabditis elegans
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: CACGTGGA
Type: Heterodimer
Binding TFs: UP00309A (Helix-loop-helix DNA-binding domain)
UP00332A (Helix-loop-helix DNA-binding domain)
UP00367A (Helix-loop-helix DNA-binding domain)
UP00373A (Helix-loop-helix DNA-binding domain)
UP00382A (Helix-loop-helix DNA-binding domain)
UP00383A (Helix-loop-helix DNA-binding domain)
UP00050A (Helix-loop-helix DNA-binding domain)
UP00060A (Helix-loop-helix DNA-binding domain)
Binding Motifs: UP00050A_1 rrawkrgTCACGTGAsymrywy
UP00060A_1 kgmsCACGTGgkcrkk
UP00309A_1 kaycwgkCACGTGactbvymg
UP00332A_1 gwcymasCACGTGsycskhw
UP00367A_1 yrdamCACGTGktymr
UP00373A_1 awwAarAAACAwws
UP00382A_1 Awkwwtwaaaawwa
UP00383A_1 wmawgGCACGTGycwwa
UP00050A_2 ygysryTmCACGTGGArrsmrgt
UP00060A_2 ktGyCAyGcGaCdk
UP00373A_2 / UP00382A_2 twdasCACGTGskawb
			
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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