DNA Binding Site
| Accessions: | ACGGATTA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | ACGGATTA |
| Type: | Heterodimer |
| Binding TFs: | UP00111A (Homeobox domain) UP00112A (Homeobox domain) UP00229A (Homeobox domain) UP00267A (Homeobox domain) UP00615C (Homeobox domain) |
| Binding Motifs: | UP00111A_1 wdrwmmGGATTArkbww UP00112A_1 aawmryTAATCCsytwv UP00229A_1 dgwrgGGATTAAtwtwy UP00267A_1 kdwrgGGATTAAtydtc UP00615C_2 gykwaaAcGGATTAaTmwtgmvw |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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