DNA Binding Site

Accessions: 5yej_F (3D-footprint 20231221)
Organisms: Mycobacterium smegmatis, Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 19
Sequence: ACTTGAACGGTGTTCAGGT
Type: Heterodimer
Binding TFs: 5yej_B (Bacterial regulatory proteins, tetR family, Tetracyclin repressor, C-terminal all-alpha domain)
5yej_C (Bacterial regulatory proteins, tetR family, Tetracyclin repressor, C-terminal all-alpha domain)
Binding Motifs: 5yej_B CTTGAACG
5yej_BC CTTGAACGnTGTTCnnG
Publications: Yan L, Tang Q, Guan Z, Pei K, Zou T, He J. Structural insights into operator recognition by BioQ in the Mycobacterium smegmatis biotin synthesis pathway. Biochim Biophys Acta Gen Subj 1862:1843-1851 (2018). [Pubmed]

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