DNA Binding Site
| Accessions: | 5ipl_2 (3D-footprint 20231221), 5ipm_2 (3D-footprint 20231221), 5ipn_2 (3D-footprint 20231221) |
| Organisms: | Escherichia coli, strain K12 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Length: | 33 |
| Sequence: | CCGCGTCAGACTCGTAGGATTATAGCATACGTG |
| Binding TFs: | 5ipl_F / 5ipm_F / 5ipn_F (Sigma-70 factor, region 1.2, Sigma-70 region 3, Sigma-70 region 2 , Sigma-70, region 4) |
| Binding Motifs: | 5ipl_F TATGCTATAATGTGTG 5ipm_F TATGCTATAATGTgtg 5ipn_F TATGCTATAATGTnTG |
| Publications: | Liu B, Zuo Y, Steitz TA. Structures of E. coli σS-transcription initiation complexes provide new insights into polymerase mechanism : (Proc). [Pubmed] |
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