DNA Binding Site
| Accessions: | MA0457.2.10 (JASPAR 2024), MA0467.3.17 (JASPAR 2024), MA0700.3.12 (JASPAR 2024) |
| Organisms: | Drosophila melanogaster, Mus musculus, Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 6 |
| Sequence: | CGATTA |
| Type: | Heterodimer |
| Binding TFs: | O54751 (Homeobox domain, Otx1 transcription factor) P50458 (Homeobox domain, LIM domain, Homeobox KN domain) Q9W1H7 (Homeobox domain) O54751 P50458 Q9W1H7 |
| Binding Motifs: | MA0457.2 yTAATT MA0467.3 GGATTA MA0700.3 CAATTA |
| Publications: | Noyes M.B, Meng X, Wakabayashi A, Sinha S, Brodsky M.H, Wolfe S.A. A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system. Nucleic acids research 36:2547-60 (2008). [Pubmed] Lee J, Myers C.A, Williams N, Abdelaziz M, Corbo J.C. Quantitative fine-tuning of photoreceptor cis-regulatory elements through affinity modulation of transcription factor binding sites. Gene therapy 17:1390-9 (2010). [Pubmed] Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] |
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