DNA Binding Site
| Accessions: | TAATATTA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | TAATATTA |
| Type: | Heterodimer |
| Binding TFs: | UP00453A (bZIP transcription factor, Transcription factor PAP1) UP00225A (Homeobox domain) UP00268A (Homeobox domain) UP00294A (SRF-type transcription factor (DNA-binding and dimerisation domain)) UP00584D (Homeobox domain) UP00595A (Homeobox domain) UP00595C (Homeobox domain) |
| Binding Motifs: | UP00225A_1 cmaTAATTrATTAym UP00268A_1 cgyddwtTAATTAawksgrm UP00294A_1 tkacctwtAATTawaybwsmw UP00453A_1 / UP00453A_2 ttswwwgATTAsTAATmdwavwr UP00453A_3 ATTACGTAA UP00584D_1 Trrkdgbayaattrtwrmtwdw UP00595A_2 ttmyywrrTAATTAyyawtwwA UP00595C_2 aakwywATaTATAyATwwhamw |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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