DNA Binding Site
| Accessions: | ATATTATG (UniPROBE 20160601) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | ATATTATG |
| Type: | Heterodimer |
| Binding TFs: | UP00473A (bZIP transcription factor) UP00059A (ARID/BRIGHT DNA binding domain) UP00584D (Homeobox domain) UP00595A (Homeobox domain) UP00595B (Homeobox domain) UP00595C (Homeobox domain) UP00595D (Homeobox domain) UP00606B (Zinc finger, C4 type (two domains)) UP00607C (Zinc finger, C4 type (two domains)) UP00607D (Zinc finger, C4 type (two domains)) UP00614D (Homeobox domain) UP00615D (Homeobox domain) UP00627B (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00627C (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00627D (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00627E (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00627F (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00627G (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) |
| Binding Motifs: | UP00059A_1 cyAATATTgmdadw UP00059A_2 brydmaATACGrrabra UP00473A_1 / UP00473A_2 gsmmamtATTACGTAAtgsmryc UP00473A_3 ATTAcTAAT UP00584D_1 Trrkdgbayaattrtwrmtwdw UP00595A_1 TdanrbbrTAATTAytrywawww UP00595B_1 wamktwTAATywATTAtartttt UP00595B_2 ttmyyargTAATTAcydwtwwA UP00595C_1 TwasksyATAATTAtwGgtwkdr UP00595C_2 aakwywATaTATAyATwwhamw UP00595D_1 dkwdwwATrTATAtATartrdv UP00606B_1 wwmrrawtrAttwAtArtwmAAt UP00607C_1 mwywkrwTgATmtywamahwrka UP00607D_1 twsywmyaTATwTAsTgstwwma UP00614D_1 wwmwymkcAkTAATTAbcCrtmw UP00615D_1 twyktwwmsTAATTAykmmcawa UP00627B_1 TwtTwawATAmAwATAAwwTwkG UP00627C_1 TwtTwawATAmAwATAAwwThkG UP00627D_1 kwtwywwCCCCCGCAyrwkyww UP00627E_1 gassrATGCGkGGGAwrdkwwa UP00627F_1 TwtTwmwATAmAwATAAwwtwkG UP00627G_1 TwtTtawATAmAwATAAwwThkG |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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