DNA Binding Site
| Accessions: | ATCATTAA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | ATCATTAA |
| Type: | Heterodimer |
| Binding TFs: | UP00113A (Homeobox domain) UP00144A (Homeobox domain) UP00196A (Homeobox domain) UP00595A (Homeobox domain) UP00596C (Homeobox domain) |
| Binding Motifs: | UP00113A_1 CgmrTTAATTAAywawm UP00144A_1 cgmrTTAATTAAtwahy UP00196A_1 grttrtTAATTAackbg UP00595A_2 ttmyywrrTAATTAyyawtwwA UP00596C_1 kkcsrmgtTAATTAakmatcgg UP00596C_2 wtmtawGkTAATTAhChhAdwaa |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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