DNA Binding Site
| Accessions: | TCGGAAAA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | TCGGAAAA |
| Type: | Heterodimer |
| Binding TFs: | UP00114A (Homeobox domain) UP00278A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00292A (Fungal Zn(2)-Cys(6) binuclear cluster domain) |
| Binding Motifs: | UP00114A_1 awwwmATCGTTTttadd UP00278A_1 ggysacyTCSGAAaymtgrg UP00292A_1 smwhrwWTCTCCGArvccrm |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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