DNA Binding Site

						

			
Accessions: ATATATTA (UniPROBE 20160601)

			
Organisms: Homo sapiens, Saccharomyces cerevisiae
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: ATATATTA
Type: Heterodimer
Binding TFs: UP00337A (Transcription factor TFIID (or TATA-binding protein, TBP))
UP00325A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00268A (Homeobox domain)
UP00294A (SRF-type transcription factor (DNA-binding and dimerisation domain))
UP00029A (Transcription factor TFIID (or TATA-binding protein, TBP))
UP00595C (Homeobox domain)
UP00595D (Homeobox domain)
UP00604D (Homeobox domain)
UP00615D (Homeobox domain)
Binding Motifs: UP00029A_1 yywwwwTATAwwwmta
UP00268A_1 cgyddwtTAATTAawksgrm
UP00294A_1 tkacctwtAATTawaybwsmw
UP00325A_1 yttwyywwTATAwwwwrkdv
UP00337A_1 vwhtaGrwATATATAtwsrwd
UP00029A_2 ccswtwwaasskabc
UP00595C_1 TwasksyATAATTAtwGgtwkdr
UP00595C_2 aakwywATaTATAyATwwhamw
UP00595D_1 dkwdwwATrTATAtATartrdv
UP00604D_1 amaTtawatavrtatwywaTwa
UP00615D_1 twyktwwmsTAATTAykmmcawa
			
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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