DNA Binding Site

Accessions: TCAGCTGA (UniPROBE 20160601)
Organisms: Saccharomyces cerevisiae, Caenorhabditis elegans
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: TCAGCTGA
Type: Heterodimer
Binding TFs: UP00324A (Helix-loop-helix DNA-binding domain)
UP00357A (Helix-loop-helix DNA-binding domain)
UP00387A (Helix-loop-helix DNA-binding domain)
Binding Motifs: UP00324A_1 gwkgmrTCACGTGAygmmbw
UP00357A_1 whyrATCAGCTGatsk
UP00387A_1 ksrACAGCTGTyrwrr
Publications: *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed]

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