DNA Binding Site

						

			
Accessions: AACAATTA (UniPROBE 20160601)

			
Organisms: Mus musculus, Homo sapiens
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: AACAATTA
Type: Heterodimer
Binding TFs: UP00004A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00014A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00023A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00064A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00071A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00075A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00091A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00096A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00145A (Homeobox domain)
UP00151A (Homeobox domain)
UP00166A (Homeobox domain)
UP00181A (Homeobox domain)
UP00034A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00585B (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
UP00595B (Homeobox domain)
Binding Motifs: UP00004A_1 khtaATTATAATwwdm
UP00014A_1 mwaAACAATTrAwhw
UP00023A_1 rwdgAACAATkraayt
UP00034A_1 mwtrwwrAACAATarawythyw
UP00064A_1 twyhATTGTTbtmamw
UP00071A_1 hwtwATTATAATwdwk
UP00075A_1 wrkwgAACAATwrrtwt
UP00091A_1 wwdrgAACAATwaahw
UP00096A_1 wtwrgAACAATwwwtw
UP00145A_1 aamAAcCAATTAAswh
UP00151A_1 taakYAATTRrtkrtr
UP00166A_1 aamAAcCAATTArkwc
UP00181A_1 marsyAATTrsygaaw
UP00004A_2 ykyasACAATrgmks
UP00014A_2 gwycacATTCAtryrat
UP00023A_2 tmwgATTATAATmcgs
UP00034A_2 gtsswaATTrwstgwgkrcksy
UP00064A_2 gkrsyraATtyrwdhm
UP00075A_2 btramTGwmATtysr
UP00096A_2 rtrytGGgtGGGwawwt
UP00071A_2 vvycwATTGTtcckhkr
UP00091A_2 wwtCatmAttwasdd
UP00585B_1 wywmtskkyTAATTAhmmkrkda
UP00595B_1 wamktwTAATywATTAtartttt
			
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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