DNA Binding Site
| Accessions: | GGCGGGAA (UniPROBE 20160601), MA0471.3.14 (JASPAR 2024), MA0471.3.19 (JASPAR 2024), MA1122.2.19 (JASPAR 2024), MA1122.2.2 (JASPAR 2024), MA1122.2.3 (JASPAR 2024), MA1122.2.6 (JASPAR 2024), MA1122.2.8 (JASPAR 2024), MA1122.2.9 (JASPAR 2024) |
| Organisms: | Saccharomyces cerevisiae, Homo sapiens |
| Libraries: | UniPROBE 20160601 1, JASPAR 2024 2 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | GGCGGGAA |
| Type: | Heterodimer |
| Binding TFs: | Q14186 (E2F/DP family winged-helix DNA-binding domain, Transcription factor DP) UP00300A (Fungal Zn(2)-Cys(6) binuclear cluster domain) O75461 (E2F/DP family winged-helix DNA-binding domain) O75461 Q14186 |
| Binding Motifs: | UP00300A_1 skgkgwAwyTCCGCCbshkks MA0471.3 GGCGGGAA MA1122.2 sGCGGGAA |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] Xu X., Bieda M., Jin V. X., Rabinovich A., Oberley M. J., Green R., Farnham P. J. A comprehensive ChIP-chip analysis of E2F1, E2F4, and E2F6 in normal and tumor cells reveals interchangeable roles of E2F family members.. Genome Res. 17:1550-1561 (2007). [Pubmed] Zhang Y, Venkatraj VS, Fischer SG, Warburton D, Chellappan SP. Genomic cloning and chromosomal assignment of the E2F dimerization partner TFDP gene family. Genomics 39:95-8 (1997). [Pubmed] |
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