DNA Binding Site
| Accessions: | ATTAATAA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | ATTAATAA |
| Type: | Heterodimer |
| Binding TFs: | UP00453A (bZIP transcription factor, Transcription factor PAP1) UP00473A (bZIP transcription factor) UP00118A (Homeobox domain, Pou domain - N-terminal to homeobox domain) UP00169A (Homeobox domain, Homeobox KN domain) UP00294A (SRF-type transcription factor (DNA-binding and dimerisation domain)) UP00584E (Homeobox domain) UP00613B (Homeobox domain, Homeobox KN domain) UP00617A (Homeobox domain, Pou domain - N-terminal to homeobox domain) UP00617B (Homeobox domain, Pou domain - N-terminal to homeobox domain) UP00617D (Homeobox domain, Pou domain - N-terminal to homeobox domain) |
| Binding Motifs: | UP00118A_1 wrtwATTAATkArkyc UP00169A_1 rrwwwTTAATTAAtwyb UP00294A_1 tkacctwtAATTawaybwsmw UP00453A_1 / UP00453A_2 ttswwwgATTAsTAATmdwavwr UP00453A_3 ATTACGTAA UP00473A_1 / UP00473A_2 gsmmamtATTACGTAAtgsmryc UP00473A_3 ATTAcTAAT UP00584E_1 tkacggwtTAATTAatywtckk UP00613B_2 ykwmrwctTAATTAaratysrr UP00617A_1 TawArtTTATTAATAhttwwab UP00617B_1 twrmrtwTATTAATAwwbwtay UP00617D_1 thravkTTATTAATAwtktmak |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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