DNA Binding Site
| Accessions: | GGGTGCAC (UniPROBE 20160601) |
| Organisms: | Saccharomyces cerevisiae, Plasmodium falciparum, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | GGGTGCAC |
| Type: | Heterodimer |
| Binding TFs: | UP00321A / UP00398A (Myb-like DNA-binding domain, Rap1, DNA-binding, Rap1 - C terminal domain) UP00344A (Transcription factor AFT) UP00393A / UP00478B (AP2 domain) UP00443C (AP2 domain) UP00611A (Homeobox domain, 'Paired box' domain) UP00611C (Homeobox domain, 'Paired box' domain) UP00611G (Homeobox domain, 'Paired box' domain) |
| Binding Motifs: | UP00321A_1 rkgtyrkGGTGTACgGrtat UP00344A_1 tyacatAkTGCACCCsmwwkg UP00393A_1 gArGGGTGCACCyh UP00398A_1 yktwcrCCCgtACACCCcrdaam UP00443C_1 waktrtrGTGCACTAaaaathd UP00478B_1 cwtrasAwrGGTGCACyswwstt UP00611A_1 rcrkmwswrTGCAyasrwcmAtr UP00611C_1 rcrkmmgtgTGCAcacatcmAtw UP00611G_1 taTkkatgtgTGCAcacdkmygh |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.