DNA Binding Site
| Accessions: | ACAATTAA (UniPROBE 20160601) |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | ACAATTAA |
| Type: | Heterodimer |
| Binding TFs: | UP00064A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00071A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00075A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00096A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00104A (Homeobox domain) UP00155A (Homeobox domain) UP00157A (Homeobox domain) |
| Binding Motifs: | UP00064A_1 twyhATTGTTbtmamw UP00071A_1 hwtwATTATAATwdwk UP00075A_1 wrkwgAACAATwrrtwt UP00096A_1 wtwrgAACAATwwwtw UP00104A_1 msvAGCAATTAAwgvwt UP00155A_1 acaAgCAATTAAwgvrT UP00157A_1 asaAgCAATTAAwrrat UP00064A_2 gkrsyraATtyrwdhm UP00075A_2 btramTGwmATtysr UP00096A_2 rtrytGGgtGGGwawwt UP00071A_2 vvycwATTGTtcckhkr |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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