DNA Binding Site
| Accessions: | MA1677.1.14 (JASPAR 2024), MA1677.1.16 (JASPAR 2024), UN0348.1.10 (JASPAR 2024), UN0376.1.10 (JASPAR 2024), MA2036.1.9 (JASPAR 2024), MA2049.1.9 (JASPAR 2024) |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 12 |
| Sequence: | GACAAGCAACGC |
| Type: | Heterodimer |
| Binding TFs: | Q84K00 (No apical meristem (NAM) protein) Q949N0 (No apical meristem (NAM) protein) O65508 (No apical meristem (NAM) protein) O65508 Q84K00 Q949N0 |
| Binding Motifs: | MA1677.1 haCAAGAAAcmw MA2036.1 / UN0348.1 wwcAAGCAAymw MA2049.1 / UN0376.1 haCAAGAAAymw |
| Publications: | Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] Zhong R, Lee C, Ye ZH. Global analysis of direct targets of secondary wall NAC master switches in Arabidopsis. Mol Plant 3:1087-103 (2010). [Pubmed] Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). [Pubmed] |
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