DNA Binding Site

Accessions: 3n97_M (3D-footprint 20231221)
Organisms: Thermus aquaticus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 21
Sequence: GGAAAAAAGTACTTGACATGG
Binding TFs: 3n97_A (Sigma-70, region 4)
Binding Motifs: 3n97_A CTTGA
3n97_ABC TCAAG
Publications: Lara-Gonzalez S, Dantas Machado AC, Rao S, Napoli AA, Birktoft J, Di Felice R, Rohs R, Lawson CL. The RNA Polymerase α Subunit Recognizes the DNA Shape of the Upstream Promoter Element. Biochemistry 59:4523-4532 (2020). [Pubmed]

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