DNA Binding Motif

						

			
Accessions: HOXA9_methyl_2 (HT-SELEX2 May2017)

			
Names: HOXA9
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: gymaTwAmms
Weblogo: 
PSSM: P0      A      C      G      T
01    311    219   1491    280      g
02      0    990      0    501      y
03   1491   1513    345    261      m
04   1491    340    592    212      a
05     12      4      0   1491      T
06   1491    179    213   1583      w
07   1491     14      0    238      A
08   1491    944    154    610      m
09    383    502    340    265      m
10    203    437    554    297      s
Binding TFs: HOXA9 (Homeobox domain, Hox9 activation region    )
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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