DNA Binding Motif

						

			
Accessions: RFX5_4 (HT-SELEX2 May2017)

			
Names: RFX5
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 17
Consensus: ayrgcAACsGTTrCyAt
Weblogo: 
PSSM: P0      A      C      G      T
01   2427   1555   1221   1554      a
02    834   2656    647   3680      y
03   3246    687   3242    463      r
04   1684   1230   4803    648      g
05    556   6106    331   2155      c
06   6238    335   1128   1164      A
07   6619    573    446    526      A
08    126   6632   1107    277      C
09    646   3282   3105    632      s
10    120    960   6690     52      G
11    370    221    264   6717      T
12    754    563    112   6510      T
13   2511    224   5982    346      r
14    594   6409   1523    230      C
15    187   3138    367   3500      y
16   6085    645    367   1097      A
17   1419   1140   1279   2918      t
Binding TFs: RFX5 (RFX DNA-binding domain, Poxvirus D5 protein-like)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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