DNA Binding Motif

Accessions: MA0018.5 (JASPAR 2024)
Names: CREB1
Organisms: Homo sapiens, Rattus norvegicus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 8
Consensus: TGATGTCA
Weblogo:
PSSM: P0 A C G T
01 1911 970 1109 75554 T
02 1728 2298 72555 2963 G
03 73505 1748 2012 2279 A
04 2186 14144 6339 56875 T
05 1417 1895 74401 1831 G
06 8889 1231 1207 68217 T
07 3533 71982 2177 1852 C
08 75819 1018 1222 1485 A
Type: Heterodimer
Binding TFs: P16220 (bZIP transcription factor, pKID domain, Basic region leucine zipper)
P16220 (bZIP transcription factor, pKID domain, Basic region leucine zipper)
P16220
Binding Sites: MA0018.5.1 / MA0018.5.10 / MA0018.5.11 / MA0018.5.12 / MA0018.5.13 / MA0018.5.14 / MA0018.5.2 / MA0018.5.3 / MA0018.5.4 / MA0018.5.6 / MA0018.5.7 / MA0018.5.9
MA0018.5.18
MA0018.5.20
MA0018.5.15
MA0018.5.16 / MA0018.5.17
MA0018.5.19
MA0018.5.5
MA0018.5.8
Publications: Portales-Casamar E, Kirov S, Lim J, Lithwick S, Swanson M.I, Ticoll A, Snoddy J, Wasserman W.W. PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation. Genome biology 8:R207 (2007). [Pubmed]

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