DNA Binding Motif

						

			
Accessions: Hoxa2_DBD (HumanTF 1.0)

			
Names: Hoxa2
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 3
Length: 10
Consensus: rsTmATTAvc
Weblogo: 
PSSM: P0      A      C      G      T
01   7453   5438   6024   4630      r
02   4303   8871   6774   3596      s
03   1652   5725    890  17820      T
04  16132   7413   1947    721      m
05  23545    422    878    143      A
06     64    380    134  23545      T
07    807   2134     33  23545      T
08  23545     16      0    458      A
09   6230   6604   6894   3818      v
10   5204   8830   4112   5398      c
Binding TFs: Hoxa2_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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