DNA Binding Motif

						

			
Accessions: 5t01_AB (3D-footprint 20231221)

			
Names: Transcription factor AP-1
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Human c-Jun DNA binding domain homodimer in complex with methylated DNA
Length: 9
Consensus: angAGTCAt
Weblogo: 
PSSM: P0      A      C      G      T
01     57     13     13     13      a
02     24     24     24     24      n
03     13     15     48     20      g
04     96      0      0      0      A
05      0      0     96      0      G
06      0      0      0     96      T
07      0     96      0      0      C
08     96      0      0      0      A
09     13     13     13     57      t
Binding TFs: 5t01_A / 5t01_B (bZIP transcription factor, Basic region leucine zipper)
Binding Sites: 5t01_C
5t01_D
			
Publications: Hong S, Wang D, Horton JR, Zhang X, Speck SH, Blumenthal RM, Cheng X. Methyl-dependent and spatial-specific DNA recognition by the orthologous transcription factors human AP-1 and Epstein-Barr virus Zta. Nucleic Acids Res 45:2503-2515 (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.