DNA Binding Motif

						

			
Accessions: POU6F1_methyl_2 (HT-SELEX2 May2017)

			
Names: POU6F1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 14
Consensus: wTATGyTAATGAgs
Weblogo: 
PSSM: P0      A      C      G      T
01    887    170    626   1242      w
02    350    335    208   2924      T
03   2924     17     43     21      A
04     64    133     19   2924      T
05     66     26   2924     38      G
06    670   1112     90   1812      y
07    272     17     41   2924      T
08   2924     31    303     19      A
09   2924      4      4      6      A
10      0     26    329   2924      T
11    153     66   2171    754      G
12   2924     33    226     73      A
13    270    563   2924    769      g
14    419    820   1109    577      s
Binding TFs: POU6F1 (Homeobox domain, Pou domain - N-terminal to homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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