DNA Binding Motif
| Accessions: | MA1819.2 (JASPAR 2024) |
| Names: | Zm00001d005892 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 8 |
| Consensus: | CGCCGCCG |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 761 24431 1309 872 C 02 795 767 25046 765 G 03 852 23527 1794 1200 C 04 535 25251 917 670 C 05 795 435 25421 722 G 06 885 23482 1696 1310 C 07 613 25022 990 748 C 08 1241 1029 24113 990 G |
| Type: | Heterodimer |
| Binding TFs: | A0A1D6ERG6 (AP2 domain) A0A1D6ERG6 |
| Binding Sites: | MA1819.2.3 MA1819.2.4 / MA1819.2.5 / MA1819.2.7 / MA1819.2.8 MA1819.2.1 / MA1819.2.20 MA1819.2.12 / MA1819.2.14 / MA1819.2.16 / MA1819.2.17 MA1819.2.19 MA1819.2.11 / MA1819.2.13 MA1819.2.10 MA1819.2.15 MA1819.2.18 MA1819.2.2 MA1819.2.6 MA1819.2.9 |
| Publications: | Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.