DNA Binding Motif
| Accessions: | MA2011.1 (JASPAR 2024) |
| Names: | ERF010 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 12 |
| Consensus: | dyCACCGACAhh |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 303 128 285 283 d 02 118 465 127 289 y 03 68 858 30 43 C 04 915 0 71 13 A 05 2 993 0 4 C 06 4 992 0 3 C 07 9 1 984 5 G 08 719 144 23 113 A 09 11 983 2 3 C 10 750 107 78 64 A 11 305 331 93 270 h 12 272 308 138 281 h |
| Type: | Heterodimer |
| Binding TFs: | Q9FH94 (AP2 domain) Q9FH94 |
| Binding Sites: | MA2011.1.8 MA2011.1.9 MA2011.1.11 MA2011.1.12 MA2011.1.13 MA2011.1.14 MA2011.1.16 MA2011.1.17 MA2011.1.18 MA2011.1.1 MA2011.1.2 MA2011.1.3 MA2011.1.10 MA2011.1.15 MA2011.1.19 MA2011.1.20 MA2011.1.4 MA2011.1.5 MA2011.1.6 MA2011.1.7 |
| Publications: | Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.