DNA Binding Motif

						

			
Accessions: M0654 (AthalianaCistrome v4_May2016)

			
Names: ANAC004.ampDAP, T02755;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: wrCTTsYtywryAAGywwsmt
Weblogo: 
PSSM: P0      A      C      G      T
01    269     24     69    238      w
02    265    121    176     38      r
03      0    597      2      1      C
04      0      0      0    600      T
05      0      0      0    600      T
06    141    197    253      9      s
07      8    155     15    422      Y
08    100     98     96    306      t
09     56    232     96    216      y
10    184    126    107    183      w
11    349     43    191     17      r
12      2    355     41    202      y
13    600      0      0      0      A
14    598      1      0      1      A
15      0      1    598      1      G
16     41    175     30    354      y
17    208     18     11    363      w
18    201     63     28    308      w
19     71    250    191     88      s
20    158    200    116    126      m
21    124     79    113    284      t
Binding TFs: T02755 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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