DNA Binding Motif

						

			
Accessions: MA1773.1 (JASPAR 2024)

			
Names: MYB51
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 21
Consensus: hwhhwwwwhwyyyACCwACyw
Weblogo: 
PSSM: P0      A      C      G      T
01    268    298    132    302      h
02    289    199    107    405      w
03    275    284    130    311      h
04    262    322    121    295      h
05    380    195    118    307      w
06    356    179    174    291      w
07    342    242    105    311      w
08    382    195    148    275      w
09    262    266 160.94    311      h
10    286 226.04    156    333      w
11 83.183    373 95.841    448      y
12 99.458    385 90.416    425      y
13    105    501 14.467    380      y
14    998  1.808      0      0      A
15      0   1000      0      0      C
16      0   1000      0      0      C
17    454  1.808  3.617    541      w
18    998      0  1.808      0      A
19 204.34    772 14.467  9.042      C
20 83.183    590 19.892    307      y
21 419.53 90.416 23.508    467      w
Type: Heterodimer
Binding TFs: O49782 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
O49782
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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