DNA Binding Motif
| Accessions: | MA0666.2 (JASPAR 2024) |
| Names: | MSX1 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | CAP-SELEX |
| Length: | 8 |
| Consensus: | syAATTAr |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 783 2126 1415 740 s 02 227 5064 0 2415 y 03 5064 125 146 0 A 04 5064 42 0 0 A 05 0 0 0 5064 T 06 0 280 0 5064 T 07 5064 0 159 0 A 08 1996 925 1322 820 r |
| Type: | Heterodimer |
| Binding TFs: | P28360 (Homeobox domain) P28360 |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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