DNA Binding Motif

Accessions: ERG_DBD_2 (HumanTF 1.0)
Names: ERG
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 14
Consensus: aCCGGAwATCCGgt
Weblogo:
PSSM: P0 A C G T
01 2846 420 952 660 a
02 1236 4878 878 184 C
03 915 4878 13 1 C
04 1 1 4878 1 G
05 3 0 4878 0 G
06 4878 2 2 2 A
07 2976 370 1 1901 w
08 4878 2 503 68 A
09 6 10 5 4878 T
10 18 4878 18 2 C
11 25 4878 11 2 C
12 10 57 4878 884 G
13 435 1194 4878 1027 g
14 1152 977 396 2353 t
Binding TFs: ERG_DBD (Ets-domain, Sterile alpha motif (SAM)/Pointed domain)
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

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