DNA Binding Motif
| Accessions: | 5ed4_A (3D-footprint 20231221) |
| Names: | Response regulator |
| Organisms: | Mycobacterium tuberculosis, strain ATCC 25618 / H37Rv |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | Structure of a PhoP-DNA complex |
| Length: | 8 |
| Consensus: | AGCTGTGA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 75 7 7 7 A 02 7 7 75 7 G 03 0 96 0 0 C 04 0 0 0 96 T 05 0 0 96 0 G 06 9 7 7 73 T 07 0 0 96 0 G 08 75 7 7 7 A |
| Binding TFs: | 5ed4_A (Response regulator receiver domain, Transcriptional regulatory protein, C terminal) |
| Binding Sites: | 5ed4_C 5ed4_D |
| Publications: | He X, Wang L, Wang S. Structural basis of DNA sequence recognition by the response regulator PhoP in Mycobacterium tuberculosis. Sci Rep : (2016). [Pubmed] |
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