DNA Binding Motif

						

			
Accessions: NR2E1_2 (HT-SELEX2 May2017)

			
Names: NR2E1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 9
Consensus: arAaGTCAa
Weblogo: 
PSSM: P0      A      C      G      T
01   3243   2136   1605   1658      a
02   8643   2957   7045   4521      r
03   8643    709   1411    136      A
04   8643   1433   2041    662      a
05      0      0   8643      0      G
06      0    725    245   8643      T
07      0   8643      0      0      C
08   8643      0   1288      0      A
09   3318   2102   1530   1693      a
Binding TFs: NR2E1 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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