DNA Binding Motif
| Accessions: | GABPA_HUMAN.H10MO.A|M01171 (HOCOMOCO 10), GABPA_MOUSE.H10MO.A|M01116 (HOCOMOCO 10) |
| Names: | GABPA |
| Organisms: | Homo sapiens, Mus musculus |
| Libraries: | HOCOMOCO 10 1 1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] |
| Notes: | Ets-related factors{3.5.2}; Ets-like factors{3.5.2.1} |
| Length: | 13 |
| Consensus: | svrCCGGAAGTgr |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 615 697 1261 177 s 02 996 805 694 255 v 03 1107 508 1030 105 r 04 144 2086 518 2 C 05 363 2369 17 1 C 06 0 0 2750 0 G 07 0 0 2750 0 G 08 2748 2 0 0 A 09 2727 1 1 21 A 10 202 29 2519 0 G 11 173 521 106 1950 T 12 398 424 1706 222 g 13 764 675 1067 244 r |
| Type: | Heterodimer |
| Binding TFs: | GABPA_HUMAN (Ets-domain, Sterile alpha motif (SAM)/Pointed domain, GA-binding protein alpha chain) GABPA_MOUSE (Ets-domain, Sterile alpha motif (SAM)/Pointed domain, GA-binding protein alpha chain) |
| Publications: | Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.