DNA Binding Motif

						

			
Accessions: HOXC10_DBD_2 (HumanTF 1.0)

			
Names: HOXC10
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 3
Length: 10
Consensus: gymATwAAaw
Weblogo: 
PSSM: P0      A      C      G      T
01   1065   1329   3755    432      g
02     83   3545     22   3755      y
03   3755   2624    589    107      m
04   3755    284    317     51      A
05    265      0      0   3755      T
06   2423     45     68   1332      w
07   3755     14     31    164      A
08   3755    319    110    238      A
09   3755    856    846    932      a
10   1444    798    549    964      w
Binding TFs: HOXC10_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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